deeptrack.optics Module

Features for optically imaging of samples

Contains features which performs physical simulations of optical devices to create camera images of samples.

Classes

Microscope

Image a sample using an optical system.

Optics

Abstract base optics class.

Fluorescence

Optical device for fluorescenct imaging.

Brightfield

Images coherently illuminated samples.

Classes

AveragePooling([ksize])	Apply average pooling to images.
Brightfield([NA, wavelength, magnification, ...])	Images coherently illuminated samples.
ConversionTable(**conversions)	Convert a dictionary of values to the desired units.
Darkfield([illumination_angle])	Images coherently illuminated samples using Darkfield.
DummyFeature([_input])	A no-op feature that simply returns the input unchanged.
Feature([_input])	Base feature class.
Fluorescence([NA, wavelength, ...])	Optical device for fluorescenct imaging
Holography	alias of Brightfield
ISCAT([illumination_angle, amp_factor])	Images coherently illuminated samples using ISCAT.
IlluminationGradient([gradient, constant, ...])	Adds a gradient in the illumination
Image(value[, copy])	Wrapper for array-like values with property tracking.
Microscope(sample, objective, **kwargs)	Image a sample using an optical system.
Optics([NA, wavelength, magnification, ...])	Abstract base optics class.
Quantity()
StructuralFeature([_input])	Provides the structure of a feature set without input transformations.